Index

A

add_self_loops() (in module topomodelx.nn.cell.can_layer) aggr_norm_func() (topomodelx.nn.simplicial.sccnn_layer.SCCNNLayer method) (topomodelx.nn.simplicial.scnn_layer.SCNNLayer method) aggregate() (topomodelx.base.message_passing.MessagePassing method) (topomodelx.nn.hypergraph.hypersage_layer.HyperSAGELayer method) Aggregation (class in topomodelx.base.aggregation) AllSet (class in topomodelx.nn.hypergraph.allset) AllSetBlock (class in topomodelx.nn.hypergraph.allset_layer) AllSetLayer (class in topomodelx.nn.hypergraph.allset_layer)

AllSetTransformer (class in topomodelx.nn.hypergraph.allset_transformer) AllSetTransformerBlock (class in topomodelx.nn.hypergraph.allset_transformer_layer) AllSetTransformerLayer (class in topomodelx.nn.hypergraph.allset_transformer_layer) apply_regular_dropout() (topomodelx.nn.hypergraph.hmpnn_layer.HMPNNLayer method) attention() (topomodelx.base.message_passing.MessagePassing method) (topomodelx.nn.cell.can_layer.MultiHeadCellAttention method) (topomodelx.nn.cell.can_layer.MultiHeadCellAttention_v2 method) (topomodelx.nn.hypergraph.allset_transformer_layer.MultiHeadAttention method) (topomodelx.nn.hypergraph.hypergat_layer.HyperGATLayer method)

B

broadcast() (in module topomodelx.utils.scatter)

C

CAN (class in topomodelx.nn.cell.can) CANLayer (class in topomodelx.nn.cell.can_layer) CCXN (class in topomodelx.nn.cell.ccxn) CCXNLayer (class in topomodelx.nn.cell.ccxn_layer) chebyshev_conv() (topomodelx.nn.simplicial.sccnn_layer.SCCNNLayer method) (topomodelx.nn.simplicial.scnn_layer.SCNNLayer method)

compute_normalization_matrices() (topomodelx.nn.hypergraph.hnhn_layer.HNHNLayer method) compute_projection_matrix() (topomodelx.nn.simplicial.san.SAN method) Conv (class in topomodelx.base.conv) CWN (class in topomodelx.nn.cell.cwn) CWNLayer (class in topomodelx.nn.cell.cwn_layer)

D

Dist2Cycle (class in topomodelx.nn.simplicial.dist2cycle)

Dist2CycleLayer (class in topomodelx.nn.simplicial.dist2cycle_layer)

F

forward() (topomodelx.base.aggregation.Aggregation method) (topomodelx.base.conv.Conv method) (topomodelx.base.message_passing.MessagePassing method) (topomodelx.nn.cell.can.CAN method) (topomodelx.nn.cell.can_layer.CANLayer method) (topomodelx.nn.cell.can_layer.LiftLayer method) (topomodelx.nn.cell.can_layer.MultiHeadCellAttention method) (topomodelx.nn.cell.can_layer.MultiHeadCellAttention_v2 method) (topomodelx.nn.cell.can_layer.MultiHeadLiftLayer method) (topomodelx.nn.cell.can_layer.PoolLayer method) (topomodelx.nn.cell.ccxn.CCXN method) (topomodelx.nn.cell.ccxn_layer.CCXNLayer method) (topomodelx.nn.cell.cwn.CWN method) (topomodelx.nn.cell.cwn_layer.CWNLayer method) (topomodelx.nn.hypergraph.allset.AllSet method) (topomodelx.nn.hypergraph.allset_layer.AllSetBlock method) (topomodelx.nn.hypergraph.allset_layer.AllSetLayer method) (topomodelx.nn.hypergraph.allset_transformer.AllSetTransformer method) (topomodelx.nn.hypergraph.allset_transformer_layer.AllSetTransformerBlock method) (topomodelx.nn.hypergraph.allset_transformer_layer.AllSetTransformerLayer method) (topomodelx.nn.hypergraph.allset_transformer_layer.MultiHeadAttention method) (topomodelx.nn.hypergraph.hmpnn.HMPNN method) (topomodelx.nn.hypergraph.hmpnn_layer.HMPNNLayer method) (topomodelx.nn.hypergraph.hnhn.HNHN method) (topomodelx.nn.hypergraph.hnhn_layer.HNHNLayer method) (topomodelx.nn.hypergraph.hypergat.HyperGAT method) (topomodelx.nn.hypergraph.hypergat_layer.HyperGATLayer method) (topomodelx.nn.hypergraph.hypersage.HyperSAGE method) (topomodelx.nn.hypergraph.hypersage_layer.GeneralizedMean method) (topomodelx.nn.hypergraph.hypersage_layer.HyperSAGELayer method) (topomodelx.nn.hypergraph.unigcn.UniGCN method) (topomodelx.nn.hypergraph.unigcn_layer.UniGCNLayer method) (topomodelx.nn.hypergraph.unigcnii.UniGCNII method) (topomodelx.nn.hypergraph.unigcnii_layer.UniGCNIILayer method) (topomodelx.nn.hypergraph.unigin.UniGIN method) (topomodelx.nn.hypergraph.unigin_layer.UniGINLayer method) (topomodelx.nn.hypergraph.unisage.UniSAGE method) (topomodelx.nn.hypergraph.unisage_layer.UniSAGELayer method) (topomodelx.nn.simplicial.dist2cycle.Dist2Cycle method) (topomodelx.nn.simplicial.dist2cycle_layer.Dist2CycleLayer method) (topomodelx.nn.simplicial.hsn.HSN method) (topomodelx.nn.simplicial.hsn_layer.HSNLayer method) (topomodelx.nn.simplicial.san.SAN method) (topomodelx.nn.simplicial.san_layer.SANConv method) (topomodelx.nn.simplicial.san_layer.SANLayer method) (topomodelx.nn.simplicial.sca_cmps.SCACMPS method) (topomodelx.nn.simplicial.sca_cmps_layer.SCACMPSLayer method) (topomodelx.nn.simplicial.sccn.SCCN method) (topomodelx.nn.simplicial.sccn_layer.SCCNLayer method) (topomodelx.nn.simplicial.sccnn.SCCNN method) (topomodelx.nn.simplicial.sccnn_layer.SCCNNLayer method) (topomodelx.nn.simplicial.scconv.SCConv method) (topomodelx.nn.simplicial.scconv_layer.SCConvLayer method) (topomodelx.nn.simplicial.scn2.SCN2 method) (topomodelx.nn.simplicial.scn2_layer.SCN2Layer method) (topomodelx.nn.simplicial.scnn.SCNN method) (topomodelx.nn.simplicial.scnn_layer.SCNNLayer method) (topomodelx.nn.simplicial.scone.SCoNe method) (topomodelx.nn.simplicial.scone_layer.SCoNeLayer method)

G

GeneralizedMean (class in topomodelx.nn.hypergraph.hypersage_layer)

generate_complex() (in module topomodelx.nn.simplicial.scone) generate_trajectories() (in module topomodelx.nn.simplicial.scone)

H

HMPNN (class in topomodelx.nn.hypergraph.hmpnn) HMPNNLayer (class in topomodelx.nn.hypergraph.hmpnn_layer) HNHN (class in topomodelx.nn.hypergraph.hnhn) HNHNLayer (class in topomodelx.nn.hypergraph.hnhn_layer) HSN (class in topomodelx.nn.simplicial.hsn)

HSNLayer (class in topomodelx.nn.simplicial.hsn_layer) HyperGAT (class in topomodelx.nn.hypergraph.hypergat) HyperGATLayer (class in topomodelx.nn.hypergraph.hypergat_layer) HyperSAGE (class in topomodelx.nn.hypergraph.hypersage) HyperSAGELayer (class in topomodelx.nn.hypergraph.hypersage_layer)

I

init_biases() (topomodelx.nn.hypergraph.hnhn_layer.HNHNLayer method)

intra_aggr() (topomodelx.nn.simplicial.sca_cmps_layer.SCACMPSLayer method)

L

LiftLayer (class in topomodelx.nn.cell.can_layer)

M

message() (topomodelx.base.message_passing.MessagePassing method) (topomodelx.nn.cell.can_layer.LiftLayer method) (topomodelx.nn.cell.can_layer.MultiHeadCellAttention method) (topomodelx.nn.cell.can_layer.MultiHeadCellAttention_v2 method) MessagePassing (class in topomodelx.base.message_passing) MLP (class in topomodelx.nn.hypergraph.allset_layer) (class in topomodelx.nn.hypergraph.allset_transformer_layer) module topomodelx.base.aggregation topomodelx.base.conv topomodelx.base.message_passing topomodelx.nn.cell.can topomodelx.nn.cell.can_layer topomodelx.nn.cell.ccxn topomodelx.nn.cell.ccxn_layer topomodelx.nn.cell.cwn topomodelx.nn.cell.cwn_layer topomodelx.nn.hypergraph.allset topomodelx.nn.hypergraph.allset_layer topomodelx.nn.hypergraph.allset_transformer topomodelx.nn.hypergraph.allset_transformer_layer topomodelx.nn.hypergraph.hmpnn topomodelx.nn.hypergraph.hmpnn_layer topomodelx.nn.hypergraph.hnhn topomodelx.nn.hypergraph.hnhn_layer topomodelx.nn.hypergraph.hypergat topomodelx.nn.hypergraph.hypergat_layer topomodelx.nn.hypergraph.hypersage topomodelx.nn.hypergraph.hypersage_layer topomodelx.nn.hypergraph.unigcn topomodelx.nn.hypergraph.unigcn_layer topomodelx.nn.hypergraph.unigcnii topomodelx.nn.hypergraph.unigcnii_layer topomodelx.nn.hypergraph.unigin topomodelx.nn.hypergraph.unigin_layer topomodelx.nn.hypergraph.unisage topomodelx.nn.hypergraph.unisage_layer topomodelx.nn.simplicial.dist2cycle topomodelx.nn.simplicial.dist2cycle_layer topomodelx.nn.simplicial.hsn topomodelx.nn.simplicial.hsn_layer topomodelx.nn.simplicial.san topomodelx.nn.simplicial.san_layer topomodelx.nn.simplicial.sca_cmps topomodelx.nn.simplicial.sca_cmps_layer topomodelx.nn.simplicial.sccn topomodelx.nn.simplicial.sccn_layer topomodelx.nn.simplicial.sccnn topomodelx.nn.simplicial.sccnn_layer topomodelx.nn.simplicial.scconv topomodelx.nn.simplicial.scconv_layer topomodelx.nn.simplicial.scn2 topomodelx.nn.simplicial.scn2_layer topomodelx.nn.simplicial.scnn topomodelx.nn.simplicial.scnn_layer topomodelx.nn.simplicial.scone topomodelx.nn.simplicial.scone_layer topomodelx.utils.scatter

MultiHeadAttention (class in topomodelx.nn.hypergraph.allset_transformer_layer) MultiHeadCellAttention (class in topomodelx.nn.cell.can_layer) MultiHeadCellAttention_v2 (class in topomodelx.nn.cell.can_layer) MultiHeadLiftLayer (class in topomodelx.nn.cell.can_layer)

N

normalize_incidence_matrices() (topomodelx.nn.hypergraph.hnhn_layer.HNHNLayer method)

P

PoolLayer (class in topomodelx.nn.cell.can_layer)

R

reset_parameters() (topomodelx.base.message_passing.MessagePassing method) (topomodelx.nn.cell.can_layer.CANLayer method) (topomodelx.nn.cell.can_layer.LiftLayer method) (topomodelx.nn.cell.can_layer.MultiHeadCellAttention method) (topomodelx.nn.cell.can_layer.MultiHeadCellAttention_v2 method) (topomodelx.nn.cell.can_layer.MultiHeadLiftLayer method) (topomodelx.nn.cell.can_layer.PoolLayer method) (topomodelx.nn.hypergraph.allset_layer.AllSetBlock method) (topomodelx.nn.hypergraph.allset_layer.AllSetLayer method) (topomodelx.nn.hypergraph.allset_transformer_layer.AllSetTransformerBlock method) (topomodelx.nn.hypergraph.allset_transformer_layer.AllSetTransformerLayer method) (topomodelx.nn.hypergraph.allset_transformer_layer.MultiHeadAttention method) (topomodelx.nn.hypergraph.hnhn_layer.HNHNLayer method) (topomodelx.nn.hypergraph.hypergat_layer.HyperGATLayer method) (topomodelx.nn.hypergraph.unigcn_layer.UniGCNLayer method) (topomodelx.nn.hypergraph.unigcnii_layer.UniGCNIILayer method) (topomodelx.nn.hypergraph.unisage_layer.UniSAGELayer method) (topomodelx.nn.simplicial.dist2cycle_layer.Dist2CycleLayer method) (topomodelx.nn.simplicial.hsn_layer.HSNLayer method) (topomodelx.nn.simplicial.san_layer.SANLayer method) (topomodelx.nn.simplicial.sca_cmps_layer.SCACMPSLayer method) (topomodelx.nn.simplicial.sccn_layer.SCCNLayer method) (topomodelx.nn.simplicial.sccnn_layer.SCCNNLayer method) (topomodelx.nn.simplicial.scconv_layer.SCConvLayer method) (topomodelx.nn.simplicial.scn2_layer.SCN2Layer method) (topomodelx.nn.simplicial.scnn_layer.SCNNLayer method) (topomodelx.nn.simplicial.scone_layer.SCoNeLayer method)

S

SAN (class in topomodelx.nn.simplicial.san) SANConv (class in topomodelx.nn.simplicial.san_layer) SANLayer (class in topomodelx.nn.simplicial.san_layer) SCACMPS (class in topomodelx.nn.simplicial.sca_cmps) SCACMPSLayer (class in topomodelx.nn.simplicial.sca_cmps_layer) scatter() (in module topomodelx.utils.scatter) scatter_add() (in module topomodelx.utils.scatter) scatter_mean() (in module topomodelx.utils.scatter) scatter_sum() (in module topomodelx.utils.scatter) SCCN (class in topomodelx.nn.simplicial.sccn) SCCNLayer (class in topomodelx.nn.simplicial.sccn_layer)

SCCNN (class in topomodelx.nn.simplicial.sccnn) SCCNNLayer (class in topomodelx.nn.simplicial.sccnn_layer) SCConv (class in topomodelx.nn.simplicial.scconv) SCConvLayer (class in topomodelx.nn.simplicial.scconv_layer) SCN2 (class in topomodelx.nn.simplicial.scn2) SCN2Layer (class in topomodelx.nn.simplicial.scn2_layer) SCNN (class in topomodelx.nn.simplicial.scnn) SCNNLayer (class in topomodelx.nn.simplicial.scnn_layer) SCoNe (class in topomodelx.nn.simplicial.scone) SCoNeLayer (class in topomodelx.nn.simplicial.scone_layer) softmax() (in module topomodelx.nn.cell.can_layer)

T

topomodelx.base.aggregation module topomodelx.base.conv module topomodelx.base.message_passing module topomodelx.nn.cell.can module topomodelx.nn.cell.can_layer module topomodelx.nn.cell.ccxn module topomodelx.nn.cell.ccxn_layer module topomodelx.nn.cell.cwn module topomodelx.nn.cell.cwn_layer module topomodelx.nn.hypergraph.allset module topomodelx.nn.hypergraph.allset_layer module topomodelx.nn.hypergraph.allset_transformer module topomodelx.nn.hypergraph.allset_transformer_layer module topomodelx.nn.hypergraph.hmpnn module topomodelx.nn.hypergraph.hmpnn_layer module topomodelx.nn.hypergraph.hnhn module topomodelx.nn.hypergraph.hnhn_layer module topomodelx.nn.hypergraph.hypergat module topomodelx.nn.hypergraph.hypergat_layer module topomodelx.nn.hypergraph.hypersage module topomodelx.nn.hypergraph.hypersage_layer module topomodelx.nn.hypergraph.unigcn module topomodelx.nn.hypergraph.unigcn_layer module topomodelx.nn.hypergraph.unigcnii module topomodelx.nn.hypergraph.unigcnii_layer module

topomodelx.nn.hypergraph.unigin module topomodelx.nn.hypergraph.unigin_layer module topomodelx.nn.hypergraph.unisage module topomodelx.nn.hypergraph.unisage_layer module topomodelx.nn.simplicial.dist2cycle module topomodelx.nn.simplicial.dist2cycle_layer module topomodelx.nn.simplicial.hsn module topomodelx.nn.simplicial.hsn_layer module topomodelx.nn.simplicial.san module topomodelx.nn.simplicial.san_layer module topomodelx.nn.simplicial.sca_cmps module topomodelx.nn.simplicial.sca_cmps_layer module topomodelx.nn.simplicial.sccn module topomodelx.nn.simplicial.sccn_layer module topomodelx.nn.simplicial.sccnn module topomodelx.nn.simplicial.sccnn_layer module topomodelx.nn.simplicial.scconv module topomodelx.nn.simplicial.scconv_layer module topomodelx.nn.simplicial.scn2 module topomodelx.nn.simplicial.scn2_layer module topomodelx.nn.simplicial.scnn module topomodelx.nn.simplicial.scnn_layer module topomodelx.nn.simplicial.scone module topomodelx.nn.simplicial.scone_layer module topomodelx.utils.scatter module TrajectoriesDataset (class in topomodelx.nn.simplicial.scone)

U

UniGCN (class in topomodelx.nn.hypergraph.unigcn) UniGCNII (class in topomodelx.nn.hypergraph.unigcnii) UniGCNIILayer (class in topomodelx.nn.hypergraph.unigcnii_layer) UniGCNLayer (class in topomodelx.nn.hypergraph.unigcn_layer) UniGIN (class in topomodelx.nn.hypergraph.unigin) UniGINLayer (class in topomodelx.nn.hypergraph.unigin_layer) UniSAGE (class in topomodelx.nn.hypergraph.unisage)

UniSAGELayer (class in topomodelx.nn.hypergraph.unisage_layer) update() (topomodelx.base.aggregation.Aggregation method) (topomodelx.base.conv.Conv method) (topomodelx.nn.hypergraph.hypergat_layer.HyperGATLayer method) (topomodelx.nn.hypergraph.hypersage_layer.HyperSAGELayer method) (topomodelx.nn.simplicial.sccnn_layer.SCCNNLayer method) (topomodelx.nn.simplicial.scnn_layer.SCNNLayer method)

V

vectorize_path() (topomodelx.nn.simplicial.scone.TrajectoriesDataset method)

W

weight_func() (topomodelx.nn.simplicial.sca_cmps_layer.SCACMPSLayer method)